Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835185.1_cds_XP_016505834.1_19127
CDS Infomation

[gene=LOC107823662] [db_xref=GeneID:107823662] [protein=scarecrow-like protein 3] [protein_id=XP_016505834.1] [location=17017..18429] [gbkey=CDS]
Sequence

ATGTTACAAGATGATGGTTCATCATCAGTGACCTCATCATCACCTCTTCAGAATTTTCCA
ATGATGTCACTTTCACCTACTTTTAATTCACCGTACAATTGGCTCAAGGAGTTGAAATCT
GAGGAAAGAGGTTTATATCTAATTCACCTTTTGCTCACTTGTGCTAACCATGTAGCTGCT
GGCAATCTTGAGAATGCTAACATTGCACTTGACCAAATCTCTCAATTAGCTTCTCCTAAT
GGAGATACAATGCAACGAATCGCCTCGTATTTCGCTGAGGCGCTTGCTGATAGGATACTG
AGATCTTGGCCTGGTATTTATAAGGCCTTGCATTCGACTAAGTTGTCGATTGTATCAGAA
GACATACTGGTCAAGAAAATGTTTTTCGAGTACTTTCCGTTCATGAAAGTAGCTTCTTTG
ATCACGAATCAAGCGATCATCGAAGCTATGGAAGGAGAAAAGATGGTTCATATTGTTGAT
CTCAATGCTTCTGAACCCCTTCAGTGGCGCGCGCTGCTTCAGGATTTGAGCGCGCGCCCT
GAAGGACCGCCCCATTTGCGGATTACGGGGGTTCATCAGCAAAAGGAAGTGTTAGAGCAA
ATAGCACATGTTCTAACAGAAGAAGCTGAAAAGTTGGATATCCCTTTTCAGTTCCATCAA
GTAGTTAGCAAATTGGAAAATCTTGATGTTGAAAAACTACGAGTTAAAACCGGGGAGGCA
TTGGCGATTAGTTCAGTTATGCAATTGCACACTCTTCTTGCACATGAAGATGAACACCAA
AAGAAATCTCCTTTGGGTCTCAAGCATATGAATGGCCTTCATTTGCAAAGGGCATTACTC
AACCAAAATACTTTAGGGGACTTGCTCGAAAAGGAAACAGCTAATGTTTTTAGTCCGGGA
AATGAATCGGCATCTTCATCTCCGCTATCTCCGACTGCATCAGCAAAGATGGACGGATTC
CTCCACGCGTTATGGGGTTTGTCTCCAAAGGTCATGGTGGTCACAGAACAAGATTCGAAC
CACAATGGAACGACCCTTATGGAAAGGCTATCCGAGTCATTGTATTTTTACGCTGCATTA
TTCGATTGTCTTGAGTTCACACTACAGAGAACGTCATTAGAGCGATTAAAGGTTGAGAAA
ATGCTATTCGGCGAGGAGATCAAGAATATCGTAGCGTGTGAGGGAGTCGAGCGGAAGGAA
AGGCACGAAAAACTGGATAAGTGGTTTCAAAGATTCGATGGAGCCGGTTTCAAGAATGTG
CCTCTGAGTTATTATGCAATGTTGCAGGCAAGGAGATTGTTGCAGAGTTATAGTTGTGAA
GGATACAAGATTAAAGAAGAGAATGGTTGCGTGGTAATTTGTTGGCAAGATCGCGCTCTT
TTTTCAGTATCTGCTTGGAGATGTAGGAGGTGA

Peptide Sequence

PEP ID

XP_016505834.1
PEP Infomation

PREDICTED: scarecrow-like protein 3 [Nicotiana tabacum]
Sequence

MLQDDGSSSVTSSSPLQNFPMMSLSPTFNSPYNWLKELKSEERGLYLIHLLLTCANHVAA
GNLENANIALDQISQLASPNGDTMQRIASYFAEALADRILRSWPGIYKALHSTKLSIVSE
DILVKKMFFEYFPFMKVASLITNQAIIEAMEGEKMVHIVDLNASEPLQWRALLQDLSARP
EGPPHLRITGVHQQKEVLEQIAHVLTEEAEKLDIPFQFHQVVSKLENLDVEKLRVKTGEA
LAISSVMQLHTLLAHEDEHQKKSPLGLKHMNGLHLQRALLNQNTLGDLLEKETANVFSPG
NESASSSPLSPTASAKMDGFLHALWGLSPKVMVVTEQDSNHNGTTLMERLSESLYFYAAL
FDCLEFTLQRTSLERLKVEKMLFGEEIKNIVACEGVERKERHEKLDKWFQRFDGAGFKNV
PLSYYAMLQARRLLQSYSCEGYKIKEENGCVVICWQDRALFSVSAWRCRR

Transcript Sequence

Gene sequence data has not been registered.